Insertion junction: CLIP2.036699_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036699
Chromosome:chromosome 13
Location:2954387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTGCAAAGATTGTTCACCGATAGGAAGGTTACCCTTACCGCGGCAA
Internal bar code:TACGGCTTATTTTGTCGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGAGTCCATCTCTCTGA
Suggested primer 2:AGTTCCGCAACACTCGTCAT