Insertion junction: CLIP2.036704_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036704
Chromosome:chromosome 8
Location:4014324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800955 (1 of 1) PF00400//PF13191 - WD domain, G-beta repeat (WD40) // AAA ATPase domain (AAA_16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACACGCACCTCCACTTTGGCCAGCGGCGCCGCCAGGAAGCGCTCCA
Internal bar code:CGGCGGAAACTTGGCGGGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTGCGCTGTCCCAAACA
Suggested primer 2:AAGATGTGTGCGTACGGTGT