Insertion junction: CLIP2.036706_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036706
Chromosome:chromosome 5
Location:310625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800514 (1 of 1) PTHR19878//PTHR19878:SF8 - AUTOPHAGY PROTEIN 16-LIKE // AUTOPHAGIC-RELATED PROTEIN 16.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGCTACAATTTCTCTTCTCCTTCATTACCGTACTTTCGAACGCACC
Internal bar code:GGCACAGCCCAACAGCTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:607
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTGCCGTACTATCCTC
Suggested primer 2:ACGGATCCGCCATGAAGTTT