Insertion junction: CLIP2.036706_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036706
Chromosome:chromosome 5
Location:310628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800514 (1 of 1) PTHR19878//PTHR19878:SF8 - AUTOPHAGY PROTEIN 16-LIKE // AUTOPHAGIC-RELATED PROTEIN 16.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACATTTGGGGGGTGGCGGGGACATAAAGGCTGGCAGGGCAAGGGAGA
Internal bar code:GTATTAAGCATCCGAAACTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGATCCGCCATGAAGTTT
Suggested primer 2:CGTGGTGCCGTACTATCCTC