Insertion junction: CLIP2.036713_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036713
Chromosome:chromosome 10
Location:3406252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444000 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAACGAAGGCGATGTTATACTTCTCCGACTCGAAGTGAGGCAGCCGC
Internal bar code:TGAGGCTTCGTATATAATATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTCGCATGAGAGCAGTT
Suggested primer 2:ACGGACTTGACCACATGCAT