Insertion junction: CLIP2.036724_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036724
Chromosome:chromosome 6
Location:7348646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299850 HLM10 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTGGCGAGGCGGCCGCTGGTACCGGTACCGGTTATAGTGTGGGCTG
Internal bar code:ATAATCATAGTTTGCAGCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGTACATGAGCGCACA
Suggested primer 2:GAGTGCCTGACTACAACGCT