Insertion junction: CLIP2.036724_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036724
Chromosome:chromosome 6
Location:7348650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299850 HLM10 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGCCGCGTGTGCCCACCTGCCTCTGGCGACTGCGTGTGTCGCAATGC
Internal bar code:GCAGGGGTCTCCACTTTTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2467
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGCCTGACTACAACGCT
Suggested primer 2:ACACTGTACATGAGCGCACA