Insertion junction: CLIP2.036727_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036727
Chromosome:chromosome 12
Location:3445971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497450 FAP412 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype; Flagellar Associated Protein 412 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCCGCGCCGTGAGGCCCTCGGCTGTGCGCGTCAAGCACCTCCACGGC
Internal bar code:GTGGCGGCGTAAGCTAACGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTCCACTGCTGAGGAGC
Suggested primer 2:TTACACCTCTTCACGCGGTC