Insertion junction: CLIP2.036738_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036738
Chromosome:chromosome 12
Location:8304022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551100 (1 of 1) PTHR36356:SF1 - EXPRESSED PROTEIN 5'UTR
Cre12.g551201 NAT28 (1 of 36) PF00583 - Acetyltransferase (GNAT) family (Acetyltransf_1); N-acetyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATGCGACAAAGATTGCCGAGAGAATGTATAATGCAGAATGGCTGATG
Internal bar code:ATCCAGGCGCAAAGTTGCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGTTTGGGTGTTGTTGA
Suggested primer 2:CCCTTCTTCATCGCCTGGTT