Insertion junction: CLIP2.036741_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036741
Chromosome:chromosome 12
Location:4054840
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGATTAATCAACCCGTGGCGTAGTTGTGCGCATGCTCCTAGTCTACAT
Internal bar code:GGGACTAGACTTGTCTACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGGAGAGTGATGCAGGA
Suggested primer 2:ACCTGTAAGTGGACGTGCAG