Insertion junction: CLIP2.036747_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036747
Chromosome:chromosome 11
Location:1895883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCTTTTGTGTGTGGGGGGGAGGCGAAAGCGGGGAAGGTGGGGAGT
Internal bar code:CCTCCGAGCTTCGGGAAATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:635
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCTTCAGTGCGCTAGT
Suggested primer 2:GAGCGGGGGTCTATGTCATG