Insertion junction: CLIP2.036752_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036752
Chromosome:chromosome 11
Location:791328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467633 (1 of 1) PTHR11918//PTHR11918:SF78 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCATTAAACTGAGGGGTTGAGGGGCGTACATGGGGTTGTGTGGTCCT
Internal bar code:ATTTGGCAGACGCCGACTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAATCGGCACACTCAACA
Suggested primer 2:AGGCCTCTTCGAACCAACAG