Insertion junction: CLIP2.036754_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036754
Chromosome:chromosome 8
Location:2321931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g371000 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype CDS
lncRNA_TCONS_00219874 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGACCCCGACGCCGCCGGCGACGACGCCGCCAGCCTCGGTTACGGATC
Internal bar code:CACGTTGCAAATGAAAGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGCCAAGCAGTAACCTC
Suggested primer 2:ATCGCATCTCCACTACGCTG