Insertion junction: CLIP2.036762_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036762
Chromosome:chromosome 3
Location:2649702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160650 (1 of 7) IPR013816 - ATP-grasp fold, subdomain 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCTGACGTCATGGCAGCCAACGCCGCCGCCGCCGCCGGCCGGCAGCG
Internal bar code:GACTAGTTTTAGAGGTTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1094
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:TCATTGCGGGGTGCTTGTAT