Insertion junction: CLIP2.036772_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036772
Chromosome:chromosome 1
Location:3235379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTAGCACAGAGCCACAGACCAGCGAAGCTTATCAGAGAGAGATCTTGA
Internal bar code:ATTAACGTATTAAACCGCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTTACTCGGTGACACGC
Suggested primer 2:GGGTAGTTGCCAACGAAGGA