Insertion junction: CLIP2.036773_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036773
Chromosome:chromosome 3
Location:3017812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163500 EX1,CGLD21 Executer 1, chloroplastic; (1 of 1) PTHR33917//PTHR33917:SF1 - FAMILY NOT NAMED // PROTEIN EXECUTER 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACGCACCTGGGAGCCTCCATCTGACAGCGCCGAGCACGCCCAGGA
Internal bar code:ACTCTATCTAACACGTGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1933
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCAAGAACGCAGTGCAG
Suggested primer 2:AGCAGCCGAAGCCAAATAGT