Insertion junction: CLIP2.036778_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036778
Chromosome:chromosome 3
Location:258585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144344 (1 of 1) IPR003613//IPR011009//IPR013083//IPR013320 - U box domain // Protein kinase-like domain // Zinc finger, RING/FYVE/PHD-type // Concanavalin A-like lectin/glucanase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGAAGCGGCGCTGCATGAAAAAGCCCACGCATGGCGACACGGTATGC
Internal bar code:TGTAACCGATGGCGAAGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2470
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGGTACTAGCCACGGGT
Suggested primer 2:GCGACTAGATGGATGCTGCT