Insertion junction: CLIP2.036796_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036796
Chromosome:chromosome 16
Location:3145610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665100 CAV3 Voltage-gated Ca2+ channel, alpha subunit; (1 of 1) IPR000048//IPR005821 - IQ motif, EF-hand binding site // Ion transport domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGGGCGCGGCTAGTGACCCGTTGCTGGCAGCTGCCCGCACCCAGTT
Internal bar code:CTTCGGGGCTGAGGCTCGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCCGATTTCGTTCCTC
Suggested primer 2:CAAGCACTGGTTGACTGCAC