Insertion junction: CLIP2.036797_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036797
Chromosome:chromosome 17
Location:3779133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726800 (1 of 1) PTHR15975//PTHR15975:SF0 - UNCHARACTERIZED // CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAGGACCCAACTGTACTGCGGATACCCCAGCGCCTGAGCGCCTGGTT
Internal bar code:TTAAAGACTTAGCTAGACTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:187
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCCAACTCCATGGCTT
Suggested primer 2:GCCGCTGTAATAAGCAAGCC