Insertion junction: CLIP2.036801_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036801
Chromosome:chromosome 12
Location:5686102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532050 (1 of 1) PF00069//PF04564//PF07714//PF12796 - Protein kinase domain (Pkinase) // U-box domain (U-box) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGGGGATGGGTGATTTGAGGTATGGTGATGGGGTGGGTGTATGGGGG
Internal bar code:TCAGCCCAGTGTGCTCATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCAAAGCACATCAAAGC
Suggested primer 2:TGTCCTGACTTTCCTGTCGC