Insertion junction: CLIP2.036802_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036802
Chromosome:chromosome 2
Location:1574034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084800 SPO11A (1 of 1) K10878 - meiotic recombination protein SPO11 (SPO11); meoisis-related DNA topoisomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGACGCCGTCATCCCTGGCTACGCTCTATCTTTGCGTGGCTACACGG
Internal bar code:TTGAAAAGGCTGACGGGTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCGGTCTTGATGTCCT
Suggested primer 2:ACCTACCCCTGCATCATCCT