Insertion junction: CLIP2.036809_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036809
Chromosome:chromosome 1
Location:2034865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011150 (1 of 2) IPR000104//IPR011598 - Antifreeze protein, type I // Myc-type, basic helix-loop-helix (bHLH) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAATGCCCCGATATCTCGGCACCGCGTCGTGATTACCGGCTGTGTGTAA
Internal bar code:TGGGGTTAACAGGCCTGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACCTGTGGTTCAATGGA
Suggested primer 2:TCCAGCTGTAGCCACCTAGT