Insertion junction: CLIP2.036810_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036810
Chromosome:chromosome 9
Location:49475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386143 (1 of 2) 1.14.11.4 - Procollagen-lysine 5-dioxygenase / Procollagen-lysine,2-oxoglutarate 5-dioxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAAGCAACTTTTTCTACTCGCTCATGTGGATGCGAGAGCCGCTGTCA
Internal bar code:GGTGTTCCATATTATTTATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1282
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCTACTTACGACCCCT
Suggested primer 2:ATGCGAAATCGATGTGTGCG