Insertion junction: CLIP2.036810_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036810
Chromosome:chromosome 9
Location:49480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386143 (1 of 2) 1.14.11.4 - Procollagen-lysine 5-dioxygenase / Procollagen-lysine,2-oxoglutarate 5-dioxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTAGTCCAGACCCAGGTCGTAGCGGTTGCCGAAGATGAAGGGGCAGC
Internal bar code:GGTGTTCCATATTATTTATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2212
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGAAATCGATGTGTGCG
Suggested primer 2:ATGGCCTACTTACGACCCCT