Insertion junction: CLIP2.036831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036831
Chromosome:chromosome 3
Location:6570319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194500 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCCCGGCCGCCGAGTCCCTCCTGTCTCGTCGTGTTCCATGTGCCCCT
Internal bar code:CGCATAGTTCAGTCGCAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:7833
LEAP-Seq percent confirming:77.5
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGTAGCTCTCTGGCTTA
Suggested primer 2:GCATGTTAGCGAAGGCGAAG