Insertion junction: CLIP2.036831_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036831
Chromosome:chromosome 3
Location:6570343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194500 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAACACTTCGACACTTTCGTAAACCGGTCTCGGAGACTCGGCCACA
Internal bar code:ATCCTAATTATTTCGCTAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5339
LEAP-Seq percent confirming:23.6842
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:116
LEAP-Seq n unique pos:152

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTTAGCGAAGGCGAAG
Suggested primer 2:ACGGGTAGCTCTCTGGCTTA