Insertion junction: CLIP2.036835_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036835
Chromosome:chromosome 3
Location:1882604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154700 (1 of 3) PF01937 - Protein of unknown function DUF89 (DUF89) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGATGACATTCTTGATTAGTCTCATGCGACCGTACGGCGTTAAGGTC
Internal bar code:AGGTACGGACTTTAGGATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2957
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTCGCATGTAACGAGC
Suggested primer 2:GGTAGTCTCCCTCCCATGGT