Insertion junction: CLIP2.036840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036840
Chromosome:chromosome 8
Location:2838384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTTGGCACTAGCCACACGCCCGCACCATTGTTTCGGTGTGCCGGCCC
Internal bar code:ATTGCAGAGCACGTAGTCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAGGAACGGGTCACAAA
Suggested primer 2:TGAAGACGAGGAGGAGGGAG