Insertion junction: CLIP2.036840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036840
Chromosome:chromosome 8
Location:2838397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTGCGTTGTCGCTTCCCCCCCAGCCGACCCCTCGAAGTAAGCTCCTG
Internal bar code:GAATACATTATGGGTGTGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGACGAGGAGGAGGGAG
Suggested primer 2:CGGTAGGAACGGGTCACAAA