Insertion junction: CLIP2.036842_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036842
Chromosome:chromosome 17
Location:3570319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTGCTGCGCTCAGCTCTGGAGGCCGGGGACCGCTTCTTCCGCGGAC
Internal bar code:GTGTCTGTAGACGCTATCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:620
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGAGCTGTTGCAGAAA
Suggested primer 2:GATGTGTTGATGAGCGACGC