Insertion junction: CLIP2.036852_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036852
Chromosome:chromosome 2
Location:8145093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144002 PUS20 (1 of 2) 5.4.99.24 - 23S rRNA pseudouridine(955/2504/2580) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGGTGGGGGCGGGGGTGCGCGGTGGGGTAGCCATAGGCCCTGTGCA
Internal bar code:GGCGTGGACGGCTCTCCTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGTCCCAAGAACTCT
Suggested primer 2:GAAGGTCCTGTGCGTGTGTA