Insertion junction: CLIP2.036853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036853
Chromosome:chromosome 8
Location:2512063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372600 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCCGCAGCCACCGCAGCCAGGTCCACAGCCGCGCCCCGCTGCTCAT
Internal bar code:GACTCATACTAGTTCTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2525
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTTCCTGACTGGCATCT
Suggested primer 2:GCACAACTCACCACGCAATT