Insertion junction: CLIP2.036858_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036858
Chromosome:chromosome 2
Location:5392540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113700 (1 of 1) PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGGACCCCTCTTGTGAAGGGCATGCGCGCTGCCGCCGCCATGGCGCC
Internal bar code:ATATATGCTAGTGGTAGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAAGGCAACCAAGGTT
Suggested primer 2:AAACACACATGCAACTCGCC