Insertion junction: CLIP2.036875_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036875
Chromosome:chromosome 12
Location:793777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492200 (1 of 6) 3.4.22.69 - SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCCGCGTATCCTGCTGTGCCGAACAGGTGCGCGGTGTTCGGGTCGTC
Internal bar code:CTGCTGGTCGATTCACCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGCATGAATCAGCCGTG
Suggested primer 2:CAAGACAACAACTGCAGCCC