Insertion junction: CLIP2.036885_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036885
Chromosome:chromosome 17
Location:226280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697350 (1 of 1) K12861 - pre-mRNA-splicing factor SPF27 (BCAS2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAGTATATCGCACGCCAGGGCCTCCGCGCGTGTGTCGGCGTGCCCCG
Internal bar code:GGGCTCGGGTGGACGATGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2265
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCCTCAGGTTAGGTTT
Suggested primer 2:ATTGCATGGTCAGCAGGGAA