Insertion junction: CLIP2.036892_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036892
Chromosome:chromosome 5
Location:2384810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238374 (1 of 1) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATAAATTATACCCCCACCCCACCCCGTGGCCCAAACCCAAACCCAAA
Internal bar code:AAATACACACATCAATTTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTGCTGTCTACTTCGC
Suggested primer 2:ATGTCCCCGCGTGTCATATC