Insertion junction: CLIP2.036893_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036893
Chromosome:chromosome 12
Location:1499042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487950 (1 of 2) IPR000742//IPR017853 - EGF-like domain // Glycoside hydrolase superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAAGGGCATAGTGCATCCCTTTGCGCCCGCAGCCTACGGCGCCCCGA
Internal bar code:GGTAGCTCCGGAATTAGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4485
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTTGTTTCCGTGTGCC
Suggested primer 2:CGAGCGCGTCAATGTACTTG