Insertion junction: CLIP2.036902_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036902
Chromosome:chromosome 15
Location:952632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639700 NCL10,RAP25,OPR93 Nuclear Control of chloroplast Like 10; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCGCTGCCGACACCGGCCCCAGCTCACCGCGCGCTGCCGCCGCTACT
Internal bar code:AACTATCGCTGGAGGCCGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2140
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTATGAGCTGAGCCTCC
Suggested primer 2:ATGCAGAATGGTTGGGGAGG