Insertion junction: CLIP2.036904_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036904
Chromosome:chromosome 12
Location:9382999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTCCGTGTATGTGACATACACACACACTTTCCCTTCCTCGTGTGTT
Internal bar code:CGGGGTGGCTGCCGGGGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGTGGGTTGGTGAGTGG
Suggested primer 2:ATTGGAATGCGGTGTAGGCA