Insertion junction: CLIP2.036908_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036908
Chromosome:chromosome 1
Location:1571963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008500 (1 of 2) PF12796//PF13857 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCTGGGGGAGGTGTGTGTGTTGTGTGTGTGCGCGTGTGTGTGTGTGT
Internal bar code:CATGCTGACGAGATCTTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1649
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCACGGGAGCTTGAAAGG
Suggested primer 2:TATGCGTCGTGCCTGTATCC