Insertion junction: CLIP2.036909_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036909
Chromosome:chromosome 3
Location:5320735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182800 AGT2 Alanine-glyoxylate transaminase; (1 of 1) K00827 - alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase (AGXT2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTTGCCACCGTACCTGTGTGATCAGCAAGAGCGAGCGCATCGTCCAC
Internal bar code:GTACGATGTTACCAACTAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2533
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACTTGGGCTGAATGCGT
Suggested primer 2:ATTGCCCATGATGCCTCCAA