Insertion junction: CLIP2.036921_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036921
Chromosome:chromosome 12
Location:4979796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524900 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGGTCCAGGGTTCAGCGACATGCCCGAAGCGCTCATCCAGCGGGTGC
Internal bar code:CAAGTGACGCGTACCAAGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTTGCAGCTCCGTCAAT
Suggested primer 2:GAATCCGAGGAGCCTGATGG