Insertion junction: CLIP2.036922_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036922
Chromosome:chromosome 6
Location:6823262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296300 SRR1 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACGGCCGGTGGAAAGTGTGGACTAATGTCAACTCAACTAGCCAGCGCC
Internal bar code:CTCTGCAATTTTTACGCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3918
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCAAGCACGACAGCTA
Suggested primer 2:TGGCTTTCTTTGTTGCGCTC