Insertion junction: CLIP2.036928_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036928
Chromosome:chromosome 17
Location:4934174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735400 VPS2B Subunit of the ESCRT-III complex; (1 of 1) K12192 - charged multivesicular body protein 2B (CHMP2B) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGGCCGGGGGGTGGGGCTTGCACGAGGGACGGAGCGGATTGGGCAGG
Internal bar code:AGTATGGATCTCTTTGGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAACCCTCCACCACCATC
Suggested primer 2:AGGAGGAAAAGCTGATCCGC