Insertion junction: CLIP2.036930_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036930
Chromosome:chromosome 6
Location:8196615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACACACCCGCCGACCGCGTGCAAGGCCTTACCCCAGCTCTCCATC
Internal bar code:CGGCAGGAGATATCGGAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:128
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCCTCTACTCCTGCATC
Suggested primer 2:CATACCGTAGTACCCGTGGC