Insertion junction: CLIP2.036934_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036934
Chromosome:chromosome 2
Location:5993165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118450 DNJ28 (1 of 1) IPR000104//IPR001623//IPR012336 - Antifreeze protein, type I // DnaJ domain // Thioredoxin-like fold; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCATTCTTACCGCCCGTGTGCCCAGCATGCCTATGAAATTCTGTCG
Internal bar code:CAGCTAAGATATAACGTCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCTGCAATGAGCCTTGA
Suggested primer 2:CAGTCCAACCGAACCATGGA