Insertion junction: CLIP2.036939_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036939
Chromosome:chromosome 10
Location:665277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422050 (1 of 1) PTHR22763:SF3 - E3 UBIQUITIN-PROTEIN LIGASE RNF115 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGGGCCGTCGCGGCAGGTGGTGCGGCGCAGTCAGGGCGAGGACGC
Internal bar code:TGTGACACAATACGGTATTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCTTCAATGTTGCCCA
Suggested primer 2:TCCATCATGCGAGACGTAGC