Insertion junction: CLIP2.036946_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036946
Chromosome:chromosome 1
Location:5951566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800105 5'UTR
Cre01.g800106 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCGGAGCCTCCGTCGCCTGCGCCATCGCCGGTGCCTCCCAGCCCGG
Internal bar code:CTTAATATACTACTCTGACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2082
LEAP-Seq percent confirming:67.7966
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAACAGGCGACGGAG
Suggested primer 2:CCAGTCCCTCTCCTCCCAG