Insertion junction: CLIP2.036948_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036948
Chromosome:chromosome 1
Location:7002718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g050000 (1 of 1) PTHR31204//PTHR31204:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 97 intron
Cre01.g050050 GUM1 Putative guanidinoacetate N-methyltransferase; (1 of 1) 2.1.1.2 - Guanidinoacetate N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGGTCCGAGGGGGAGTGTTGGTTATTTGGGTTATTGGGCAGCACTGC
Internal bar code:AGTGTGAGGTATAAGTTAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACGACCTGCTGCTGGAG
Suggested primer 2:TTGTTCAGCCCTGCAAAGGA