Insertion junction: CLIP2.036950_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036950
Chromosome:chromosome 8
Location:3744598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380650 GT90-13,GT90F13 GT90 family protein 13; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCTCTCAATCGAGGGCTGCCGTGTGTGTGTGAGTCTGTGAGAGAGA
Internal bar code:TATTTCGTTAGTTACTTTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:753
LEAP-Seq percent confirming:42.5
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGCAGCAGACACAGGTA
Suggested primer 2:CCACAGTCAACAACCTTGCG